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Table 4 Protein identifications by mass spectrometry

From: Proteomic Analysis of Two Non-Bronchoscopic Methods of Sampling the Lungs of Patients with the Acute Respiratory Distress Syndrome (ARDS)

Spot number

Protein

Protein score confidence (%)

Proteins differentially expressed in s-Cath compared to mini-BAL

 1

Transthyretin precursor

96

 2

Calgranulin B (S100A9, MRP-14)

100

 3

Calgranulin B (S100A9, MRP-14)

100

 4

Calgranulin B (S100A9, MRP-14)

99

 5

Calgranulin B (S100A9, MRP-14)

99

 6

Calgranulin B (S100A9, MRP-14)

100

 7

No match

N/A

 8

Tyrosine protein kinase ZAP-70

92

 9

Calgranulin A (S100A8, MRP-8)

100

 10

Calgranulin A (S100A8, MRP-8)

100

 11

Calgranulin A (S100A8, MRP-8)

100

 12

Calgranulin A (S100A8, MRP-8)

100

 13

Annexin A5

100

 14

Annexin A3

100

 15

Squamous cell carcinoma antigen 1

100

 16

Apolipoprotein A1

100

 17

Hemoglobin beta chain

100

Proteins similar in s-Cath and mini-BAL

 18

Haptoglobin

100

 19

Alpha 1 antitrypsin

100

 20

IgA (heavy chain)

100

 21

Erythrpoietin precursor

98

 22

Leukocyte elastase inhibitor

95

 23

MAP3K12 binding inhibitory protein

99

 24

Rab GDP dissociation inhibitor

100

 25

Pescadillo homolog 1 (Pes1)

97

 26

Haptoglobin

100

 27

Fibrinogen (gamma chain)

100

 28

Alpha 1 antichymotrypsin

100

 29

Complement C4

100

 30

Serum amyloid protein component

100

 31

Complement C4

100

 32

Heat shock protein 1

100

  1. A cutoff of total peptides >5 and unique peptides >2 was used for protein identification.