Table 2 A comparison of corrected mean observation frequency per gene symbol of apolipoproteins across COVID-19, ICU-ARDS and Normal Human Plasma (NHP)
Gene_Symbol | COVID-19 | COVID-19 | COVID-19 | ICU-ARDS | ICU-ARDS | ICU-ARDS | NHP | NHP | NHP | OIT | OIT | OIT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
X!TANDEM | SEQUEST | SEQUEST | X!TANDEM | SEQUEST | SEQUEST | X!TANDEM | SEQUEST | SEQUEST | X!TANDEM | SEQUEST | SEQUEST | |
TRYP/STYP(%NHP) | TRYP(%NHP) | STYP(%NHP) | TRYP/STYP(%NHP) | TRYP(%NHP) | STYP(%NHP) | TRYP/STYP | TRYP | STYP | TRYP/STYP | TRYP | STYP | |
APOA | 0(0) | 24(75) | 3(100) | 1(-) | 53(166) | 3(100) | 0 | 32 | 3 | 0 | 2 | 0 |
ApoA-IV | 0(0) | 1(-) | 1(-) | 0(0) | 0(0) | 1(-) | 0 | 0 | 0 | 0 | 0 | 0 |
APOA1 | 476(18) | 1061(14) | 176(11) | 1862(72) | 5519(74) | 1162(75) | 2588 | 7440 | 1546 | 374 | 652 | 86 |
APOA1BP | 3(100) | 35(113) | 52(95) | 1(33) | 33(106) | 48(87) | 3 | 31 | 55 | 3 | 9 | 7 |
APOA2 | 76(27) | 284(26) | 12(150) | 218(76) | 825(75) | 16(200) | 285 | 1103 | 8 | 60 | 116 | 6 |
APOA4 | 38(7) | 134(12) | 89(23) | 346(68) | 776(70) | 291(75) | 510 | 1111 | 390 | 272 | 550 | 142 |
APOA5 | 1(-) | 22(88) | 45(141) | 2(-) | 22(88) | 32(100) | 0 | 25 | 32 | 3 | 3 | 6 |
APOB | 3(20) | 146(97) | 168(114) | 5(33) | 154(103) | 186(126) | 15 | 150 | 148 | 24 | 52 | 27 |
apoB28.1 | 0(0) | 1(50) | 6(60) | 0(0) | 2(100) | 5(50) | 0 | 2 | 10 | 0 | 1 | 5 |
APOB48R | 10(-) | 206(94) | 473(108) | 9(-) | 293(134) | 598(137) | 0 | 219 | 437 | 2 | 49 | 72 |
APOBEC1 | 3(75) | 18(225) | 13(118) | 2(50) | 11(138) | 7(64) | 4 | 8 | 11 | 0 | 5 | 8 |
APOBEC2 | 0(0) | 29(242) | 22(76) | 2(100) | 24(200) | 25(86) | 2 | 12 | 29 | 0 | 2 | 3 |
APOBEC3A | 0(0) | 13(54) | 9(90) | 2(67) | 18(75) | 15(150) | 3 | 24 | 10 | 0 | 1 | 3 |
APOBEC3A_B | 0(0) | 13(65) | 8(80) | 2(100) | 18(90) | 15(150) | 2 | 20 | 10 | 0 | 4 | 3 |
APOBEC3B | 1(-) | 24(65) | 22(88) | 1(-) | 20(54) | 25(100) | 0 | 37 | 25 | 0 | 1 | 4 |
APOBEC3C | 0(0) | 10(71) | 11(110) | 0(0) | 10(71) | 3(30) | 0 | 14 | 10 | 0 | 4 | 1 |
APOBEC3D | 1(-) | 38(88) | 61(117) | 0(0) | 34(79) | 59(113) | 0 | 43 | 52 | 1 | 6 | 5 |
APOBEC3F | 0(0) | 22(65) | 25(114) | 0(0) | 21(62) | 16(73) | 0 | 34 | 22 | 0 | 0 | 0 |
APOBEC3G | 1(-) | 88(55) | 40(143) | 1(-) | 63(40) | 42(150) | 0 | 159 | 28 | 0 | 1 | 0 |
APOBEC3H | 0(0) | 20(83) | 24(171) | 0(0) | 16(67) | 15(107) | 2 | 24 | 14 | 0 | 3 | 4 |
APOBEC4 | 1(-) | 19(136) | 33(138) | 1(-) | 23(164) | 45(188) | 0 | 14 | 24 | 0 | 1 | 1 |
APOBR | 11(-) | 221(105) | 484(109) | 10(-) | 297(141) | 619(139) | 0 | 211 | 446 | 2 | 50 | 72 |
APOC1 | 0(0) | 9(11) | 9(113) | 7(27) | 59(75) | 5(63) | 26 | 79 | 8 | 25 | 23 | 2 |
APOC2 | 6(27) | 13(37) | 5(500) | 34(155) | 52(149) | 1(100) | 22 | 35 | 1 | 16 | 8 | 0 |
APOC3 | 20(12) | 62(21) | 8(160) | 95(58) | 206(70) | 5(100) | 165 | 296 | 5 | 31 | 41 | 1 |
APOC4 | 21(175) | 21(210) | 21(700) | 22(183) | 16(160) | 10(333) | 12 | 10 | 3 | 1 | 3 | 1 |
APOC4-APOC2 | 30(81) | 37(61) | 18(360) | 65(176) | 100(164) | 5(100) | 37 | 61 | 5 | 22 | 16 | 1 |
APOD | 5(12) | 37(32) | 21(51) | 38(90) | 105(90) | 34(83) | 42 | 117 | 41 | 42 | 86 | 12 |
APOE | 1(2) | 39(21) | 49(39) | 6(11) | 60(33) | 76(60) | 56 | 184 | 127 | 35 | 79 | 35 |
APOF | 1(50) | 15(75) | 28(350) | 2(100) | 14(70) | 11(138) | 2 | 20 | 8 | 8 | 18 | 5 |
APOH | 6(38) | 86(25) | 59(42) | 16(100) | 212(62) | 64(46) | 16 | 344 | 140 | 17 | 216 | 97 |
APOL1 | 4(24) | 56(98) | 52(91) | 5(29) | 41(72) | 43(75) | 17 | 57 | 57 | 14 | 33 | 16 |
APOL2 | 0(0) | 35(109) | 63(115) | 0(0) | 35(109) | 45(82) | 0 | 32 | 55 | 1 | 5 | 14 |
APOL3 | 1(100) | 25(156) | 45(180) | 3(300) | 11(69) | 16(64) | 1 | 16 | 25 | 1 | 2 | 2 |
APOL4 | 0(0) | 20(71) | 28(112) | 2(200) | 15(54) | 26(104) | 1 | 28 | 25 | 0 | 7 | 9 |
APOL5 | 2(67) | 78(94) | 84(83) | 3(100) | 63(76) | 68(67) | 3 | 83 | 101 | 0 | 12 | 23 |
APOL6 | 0(0) | 78(91) | 130(118) | 0(0) | 77(90) | 117(106) | 3 | 86 | 110 | 0 | 4 | 5 |
APOLD1 | 0(0) | 18(86) | 48(112) | 0(0) | 27(129) | 52(121) | 2 | 21 | 43 | 1 | 7 | 5 |
APOM | 9(43) | 22(33) | 27(100) | 25(119) | 20(30) | 21(78) | 21 | 66 | 27 | 6 | 17 | 0 |
APOO | 0(0) | 17(63) | 28(311) | 2(-) | 19(70) | 27(300) | 0 | 27 | 9 | 0 | 1 | 2 |
APOOL | 3(150) | 62(111) | 197(158) | 2(100) | 75(134) | 226(181) | 2 | 56 | 125 | 0 | 21 | 4 |
APOPT1 | 1(-) | 37(116) | 44(142) | 1(-) | 35(109) | 30(97) | 0 | 32 | 31 | 1 | 2 | 5 |