Table 1 Proteins and glycosylation sites identified from human platelet samples using the ERLIC approach

P08195

4F2 cell-surface antigen heavy chain

K.DASSFLAEWQ#NITK.G

264

K.SLVTQYL#NATGNR.W

323

R.LLIAGT#NSSDLQQILSLLESNK.D

280

O14672

ADAM 10

R.#NISQVLEK.K

439

R.I#NTTADEKDPTNPFR.F

278

P01009

Alpha-1-antitrypsin

K.YLG#NATAIFFLPDEGK.L

271

P35613

Basigin

K.ILLTCSL#NDSATEVTGHR.W

160

P20645

Cation-dependent mannose-6-phosphate receptor

R.EAG#NHTSGAGLVQINK.S

83

R.L#NETHIF#NGSNWIMLIYK.G

107, 113

Q13740

CD166 antigen

K.IIISPEE#NVTLTCTAENQLER.T

480

P27701

CD82 antigen

R.DY#NSSREDSLQDAWDYVQAQVK.C

129

Q8IWA5

Choline transporter-like protein 2

K.TCNPETFPSS#NESR.Q

417

R.K#NITDLVEGAK.K

200

P10909

Clusterin

R.LA#NLTQGEDQYYLR.V

374

P08174

Complement decay-accelerating factor

K.GSQWSDIEEFC#NR.S

95

P46977

Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit STT3A

R.TILVDNNTW#NNTHISR.V

548

Q07108

Early activation antigen CD69

K.EFNNWF#NVTGSDK.C

166

Q9Y6C2

EMILIN-1

R.LGAL#NSSLQLLEDR.L

794

Q96AP7

Endothelial cell-selective adhesion molecule

R.LQGVPHVGA#NVTLSCQSPR.S

169

P42892

Endothelin-converting enzyme 1

K.EYLEQISTLI#NTTDR.C

383

K.HLLE#NSTASVSEAER.K

166

R.FF#NFSWR.V

539

R.LGGW#NITGPWAK.D

210

P54852

Epithelial membrane protein 3

K.ESLNLWYDCTWN#NDTK.T

47

P02679

Fibrinogen gamma chain

K.VDKDLQSLEDILHQVE#NK.T

78

P02751

Fibronectin

K.LDAPTNLQFV#NETDSTVLVR.W

1007

R.DQCIVDDITYNV#NDTFHK.R

528

Q9BX51

Gamma-glutamyltransferase-like protein 6

R.LHNQLLP#NVTTVER.N

167

Q68CP4

Heparan-alpha-glucosaminide N-acetyltransferase

R.FGEFG#NYSLLVK.N

162

P17301

Integrin alpha-2

K.GEYFV#NVTTR.I

1074

K.QNNQVAIVY#NITLDADGFSSR.V

699

K.T#NMSLGLILTR.N

112

R.TASCS#NVTCWLK.D

1057

R.YFF#NVSDEAALLEK.A

343

P08648

Integrin alpha-5

K.G#NLTYGYVTIL#NGSDIR.S

297, 307

K.NAL#NLTFHAQNVGEGGAYEAELR.V

675

R.TEKEPLSDPVGTCYLSTD#NFTR.I

182

P23229

Integrin alpha-6

K.EINSL#NLTESHNSR.K

930

K.QLSCVANQ#NGSQADCELGNPFK.R

770

K.YQTL#NCSVNVNCVNIR.C

966

R.LW#NSTFLEEYSK.L

997

P06756

Integrin alpha-V

R.TAADTTGLQPILNQFTPA#NISR.Q

615

P05556

Integrin beta-1

K.DTCTQECSYF#NITK.V

669

R.KCS#NISIGDEVQFEISITSNK.C

417

P05106

Integrin beta-3

K.DTGKDAV#NCTYK.N

680

R.CNNG#NGTFECGVCR.C

478

R.DLPEELSLSF#NATCLNNEVIPGLK.S

397

R.LRPDDSK#NFSIQVR.Q

125

P13598

Intercellular adhesion molecule 2

K.AAPAPQEATATF#NSTADR.E

176

K.GSLEV#NCSTTCNQPEVGGLETSLDK.I

47

R.G#NETLHYETFGK.A

153

Q14392

Leucine-rich repeat-containing protein 32

R.LIYL#NLSNNLIR.L

271

Q9UIQ6

Leucyl-cystinyl aminopeptidase

K.SGVI#NLTEEVLWVK.V

682

P08575

Leukocyte common antigen

K.YA#NITVDYLYNK.E

232

R.SFH#NFTLCYIK.E

419

Q08722

Leukocyte surface antigen CD47

K.SDAVSHTG#NYTCEVTELTR.E

111

R.DIYTFDGAL#NK.S

73

P11279

Lysosome-associated membrane glycoprotein 1

K.E#NTSDPSLVIAFGR.G

83

R.GHTLTL#NFTR.N

102

R.YSVQLMSFVY#NLSDTHLFP#NASSK.E

120, 129

P13473

Lysosome-associated membrane glycoprotein 2

K.IAVQFGPGFSWIA#NFTK.A

101

P04156

Major prion protein

K.GE#NFTETDVK.M

197

Q6P4Q7

Metal transporter CNNM4

K.DLVVQQLV#NVSR.R

122

Q13201

Multimerin-1

K.SIHLSINFFSL#NK.T

921

K.V#NESVVSIAAQQK.F

431

R.L#NDSIQTLVNDNQR.Y

783

R.SILYYESL#NK.T

507

Q92542

Nicastrin

K.A#NNSWFQSILR.Q

530

K.IYIPL#NK.T

45

P51575

P2X purinoceptor 1

K.CVAF#NDTVK.T

153

K.TLHPLCPVFQLGYVVQESGQ#NFSTLAEK.G

242

R.EAE#NFTLFIK.N

184

P53801

Pituitary tumor-transforming gene 1 protein-interacting protein

K.TCEECLK#NVSCLWCNTNK.A

54

P16284

Platelet endothelial cell adhesion molecule

K.AVYSVMAMVEHSG#NYTCK.V

301

K.DDVLFY#NISSMK.S

84

K.EGKPFYQMTS#NATQAFWTK.Q

551

R.L#NLSCSIPGAPPA#NFTIQK.E

344, 356

P16671

Platelet glycoprotein 4

K.#NCTSYGVLDISK.C

321

R.NYIVPILWL#NETGTIGDEK.A

417

R.QFWIFDVQNPQEVMM#NSSNIQVK.Q

79

P40197

Platelet glycoprotein V

K.LLDLSGN#NLTHLPK.G

181

R.ISALGLPT#NLTHILLFGMGR.G

51

R.LP#NLSSLTLSR.N

243

Q6UX71

Plexin domain-containing protein 2

R.V#NLSFDFPFYGHFLR.E

160

O15031

Plexin-B2

R.ALS#NISLR.L

127

R.SI#NVTGQGFSLIQR.F

1002

R.TEAGAFEYVPDPTFE#NFTGGVK.K

1099

Q9NZQ7

Programmed cell death 1 ligand 1

K.LF#NVTSTLR.I

192

P43119

Prostacyclin receptor

R.#NSSLLGLAR.G

78

O95866

Protein G6b

R.V#NLSCGGVSHPIR.W

32

Q9H0X4

Protein ITFG3

R.YKPDTLAVAVE#NGTGTDR.Q

389

P16109

P-selectin

K.AYSW#NISR.K

54

R.AFQYDT#NCSFR.C

411

R.V#NCSHPFGAFR.Y

460

Q12913

Receptor-type tyrosine-protein phosphatase eta

K.IHVAGETDSSNL#NVSEPR.A

413

K.YEIDVG#NESTTLGYYNGK.L

910

R.ACVAGFT#NITFHPQNK.G

937

R.VEITT#NQSIIIGGLFPGTK.Y

501

R.Y#NATVYSQAA#NGTEGQPQAIEFR.T

342, 351

Q9Y210

Short transient receptor potential channel 6

K.AQSIIDA#NDTLKDLTK.V

561

Q9NXL6

SID1 transmembrane family member 1

R.VYV#NSSSENLNYPVLVVVR.Q

83

Q8IVB4

Sodium/hydrogen exchanger 9

K.LTFSPSTLLV#NITDQVYEYK.Y

96

Q99523

Sortilin

K.DITDLI#NNTFIR.T

162

R.HLYTTTGGETDFT#NVTSLR.G

406

Q6UWL2

Sushi domain-containing protein 1

R.EQVPVVCLDLYPTTDYTV#NVTLLR.S

470

R.TPEVCLALYPGT#NYTV#NISTAPPR.R

367, 371

R.WYLA#NFSHATSF#NFTTR.E

439, 447

P07996

Thrombospondin-1

K.GCSSSTSVLLTLDNNVV#NGSSPAIR.T

248

K.VV#NSTTGPGEHLR.N

1067

Q9BX74

TM2 domain-containing protein 1

R.LSIT#NETFR.K

197

Q9NXH8

Torsin family protein C9orf167

R.FVLQ#NASR.A

314

Q8NFQ8

Torsin-1A-interacting protein 2

K.HL#NASNPTEPATIIFTAAR.E

286

P01137

Transforming growth factor beta-1

R.LASPPSQGEVPPGPLPEAVLALY#NSTR.D

82

O15321

Transmembrane 9 superfamily protein member 1

R.IIFA#NVSVR.D

178

Q9HD45

Transmembrane 9 superfamily protein member 3

R.IVDV#NLTSEGK.V

174

Q4KMQ2

Transmembrane protein 16F

K.L#NITCESSK.K

361

Q9Y274

Type 2 lactosamine alpha-2,3-sialyltransferase

K.NAYH#NVTAEQLFLK.D

308

Q15904

Vacuolar ATP synthase subunit S1

R.ILFWAQ#NFSVAYK.D

273