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Table 1 Summary of glycoproteomic databases

From: Glycoproteomic and glycomic databases

Database Type Species Method Entries
Unipep N-Glycosylated proteins and peptides Homo sapiens Hydrazide chemistry & Solid Phase Extraction, in-silico triptic digestion of IPI proteins, and prediction of NXS/T glycosylation site with proteotypic potential 2265
Glycofly N-Glycosylated proteins and peptides Drosophila melanogaster Hydrazide chemistry and Solid Phase Extraction 740
Glycofish N-Glycosylated proteins and peptides Danio Rerio Hydrazide chemistry and Solid Phase Extraction 269
GlycoSuiteDB O-linked and N-linked Glycoproteins and glycans   Published glycoproteins with different methods 9436
GlycoProtDB N2 and mouse tissues N-Glycoproteins Caenorhabditis elegans Lectin Concavilin A Chromatography 1465
Mus Musculus
O -GlycBase NetOGlyc O and C-Glycosylated proteins Combination of references Data curation from literature and coupling ZFN gene targeting, SimpleCell and Lectin Chromatography 2413
3000
dbOGAP O-GlcNAcylated proteins Homo Sapiens Curation from literature and SVM based prediction 798 (exp) 300 (pred)
Mus Musculus
Rattus Norvegicus
Drosophila Melanogaster
Xenopus Laevis