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Figure 2 | Clinical Proteomics

Figure 2

From: Critical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue

Figure 2

Qualitative and quantitative method comparison. Top: Unsupervised hierarchical cluster analysis based on protein (A) and peptide (B) label-free quantitative data, respectively. Middle: Venn diagrams illustrating distribution of all identified proteins (C) and peptides (D). Percentage of common proteins and peptides are indicated in yellow. Bottom: Dot plots describing correlation of protein (E) and peptide (F) abundance between DT and FASP (purple), DT and ISD (blue-green), FASP and ISD (bronze). Pearson correlation coefficients are also reported.

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Clinical Proteomics

ISSN: 1559-0275