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Table 2 List of novel proteins identified in C. neoformans var. grubii

From: Proteogenomic analysis of pathogenic yeast Cryptococcus neoformans using high resolution mass spectrometry

 

Protein name

Genome search specific peptide

Genomic co – ordinates of novel gene

GenBank Accession (Transcript identifier)

Homologs in related species

Putative function

1

CNAG_IOB_prot1

STPLTVSEDQEDELLSIVPIK; AIVGSGLGILSVWNR

Chromosome 1: 1026293–1027893; Negative strand

GenBank: JZ152657.1 (CNAG_IOB_PROT1)

XP_777889.1 (Cryptococcus neoformans var. neoformans B-3501A); XP_566713.1 (Cryptococcus neoformans var. neoformans JEC21); EAU84048.2 (Coprinopsis cinerea okayama 7#130); EDP43708.1 (Malassezia globosa CBS 7966);

Monoubiquitination related protein

2

CNAG_IOB_prot2

DLEIGAPVSIGDTPSPEDK; SLSPEVQASLPADIR

Chromosome 2: 852949–855029; Positive strand

GenBank: JZ152658.1 (CNAG_IOB_PROT2)

XP_777044.1 (Cryptococcus neoformans var. neoformans B-3501A);

Integrase rve protein

3

CNAG_IOB_prot3

LFDNDADGDDDDDQGAVNVNIR

Chromosome 5: 65512–66695; Positive strand

GenBank: JZ152659.1 (CNAG_IOB_PROT3)

XP_570553.1 (Cryptococcus neoformans var. neoformans JEC21); XP_776190.1 (Cryptococcus neoformans var. neoformans B-3501A);

Hypothetical protein

4

CNAG_IOB_prot4

WGILEGEFGK, LTFQFITSSEK, LVNEGDWEGGLSEVEDIVR

Chr 11: 13611–17959; Negative strand

GenBank: JZ152660.1 (CNAG_IOB_PROT4)

XP_776934.1 (Cryptococcus neoformans var. neoformans B-3501A), XP_569839.1 (Cryptococcus neoformans var. neoformans JEC21), XP_003192571.1 (Cryptococcus gattii WM276)

Retrograde transport, endosome to Golgi-related protein