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Table 1 Number of identified peptides and proteins in three replicates of iTRAQ experiment on pooled samples

From: Urine proteome of autosomal dominant polycystic kidney disease patients

Replicate (IEF gel strip)

Number of peptides (accepted PSM’s)

Number of proteins (proteins ≥ 2 peptides)

1

9530

2430 (1327)

2

9814

2637 (1353)

3

11329

2810 (1582)