Table 2 Correlation filtered 2D DDA/IDA and SWATH protein differences of magnitude greater than 1.59 (threefold up regulating at CPB-1-hour) from both methods marked in (A) and less than −1.59 (threefold down regulating at CPB-1-hour) marked in (B)
From: A proteomic evaluation of urinary changes associated with cardiopulmonary bypass
SWATH (log2 intensity ratio) | DDA/IDA (log2 intensity ratio) | UNIPROT entry | Description |
|---|---|---|---|
(A) | |||
2.53 | 3.09 | P01023 | Alpha-2-macroglobulin |
1.78 | 3.53 | P04083 | Annexin A1 |
2.05 | 3.04 | P04003 | C4b-binding protein alpha chain |
3.53 | 5.73 | P00915 | Carbonic anhydrase 1 |
1.82 | 4.47 | P49913 | Cathelicidin antimicrobial peptide |
1.87 | 2.36 | P36222 | Chitinase-3-like protein 1 |
3.47 | 4.00 | P08123 | Collagen alpha-2(I) chain |
1.84 | 2.82 | P09871 | Complement C1Â s subcomponent |
1.86 | 2.01 | P02671 | Fibrinogen alpha chain |
2.37 | 2.03 | P02675 | Fibrinogen beta chain |
1.76 | 4.09 | P30043 | Flavin reductase (NADPH) |
1.64 | 1.84 | P00738 | Haptoglobin |
2.1 | 1.79 | P01860 | Ig gamma-3 chain C region |
2.09 | 1.99 | P13645 | Keratin, type I cytoskeletal 10 |
2.3 | 4.12 | P02533 | Keratin, type I cytoskeletal 14 |
3.48 | 6.95 | P08779 | Keratin, type I cytoskeletal 16 |
5.44 | 5.87 | Q04695 | Keratin, type I cytoskeletal 17 |
2.17 | 4.22 | P13647 | Keratin, type II cytoskeletal 5 |
2.09 | 2.79 | P02788 | Lactotransferrin |
3.18 | 5.10 | P14780 | Matrix metalloproteinase-9 |
2.22 | 2.94 | P05164 | Myeloperoxidase |
2.48 | 3.59 | P05109 | Protein S100-A8 |
(B) | |||
−1.82 | −1.94 | P02763 | Alpha-1-acid glycoprotein 1 |
−2.35 | −2.10 | P05090 | Apolipoprotein D |
−2.14 | −3.50 | P55287 | Cadherin-11 |
−2.23 | −2.87 | P19022 | Cadherin-2 |
−1.64 | −1.80 | P49747 | Cartilage oligomeric matrix protein |
−2.39 | −2.86 | P39059 | Collagen alpha-1(XV) chain |
−1.66 | −2.32 | P08174 | Complement decay-accelerating factor |
−1.64 | −2.43 | Q9HCU0 | Endosialin |
−1.92 | −2.97 | P17900 | Ganglioside GM2 activator |
−3.02 | −2.24 | Q96RW7 | Hemicentin-1 |
−2.31 | −2.30 | O75144 | ICOS ligand |
−2.31 | −2.63 | Q9BRK3 | Matrix-remodeling-associated protein 8 |
−1.72 | −2.20 | P08571 | Monocyte differentiation antigen CD14 |
−1.78 | −1.62 | Q9BXP8 | Pappalysin-2 |
−2.63 | −1.72 | P0DJD8 | Pepsin A-3 |
−2.16 | −1.72 | Q6UXB8 | Peptidase inhibitor 16 |
−1.7 | −2.24 | Q9HCN6 | Platelet glycoprotein VI |
−1.92 | −1.60 | P07602 | Prosaposin |
−1.88 | −2.83 | Q8WZ75 | Roundabout homolog 4 |
−1.79 | −2.70 | O00241 | Signal-regulatory protein beta-1 |
−2.02 | −3.47 | P19320 | Vascular cell adhesion protein 1 |
−2.16 | −2.73 | Q6EMK4 | Vasorin |
−1.79 | −2.34 | Q12907 | Vesicular integral-membrane protein VIP36 |
−2.33 | −2.58 | Q96DA0 | Zymogen granule protein 16 homolog B |