Table 2 Proteins that decreased in MSC in response to IFN-γ treatment

(A)

 Q9H6X2

ANTXR1

Anthrax toxin receptor 1

1.1

3.9

CTL

2.2

CTL

 Q8IZU8

DSEL

Dermatan-sulfate epimerase-like protein

CTL

–

CTL

–

CTL

 P17342

NPR3

Atrial natriuretic peptide receptor 3

5.2

1.3

CTL

CTL

CTL

 Q14123

PDE1C

Calcium/calmodulin-dependent 3′,5′-cyclic nucleotide phosphodiesterase 1C

1.1

6.2

CTL

CTL

2.1

 O00411

POLRMT

DNA-directed RNA polymerase, mitochondrial

CTL

CTL

4.4

0.7

1.7

 Q13885

TUBB2A

Tubulin beta-2A chain

–

–

6.5

11.6

6.4

 Q86Y38

XYLT1

Xylosyltransferase 1

3.0

CTL

3.4

CTL

1.3

(B)

 Q9UPQ3

AGAP1

Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1

4.3

6.3

CTL

4.0

0.8

 Q9ULJ7

ANKRD50

Ankyrin repeat domain-containing protein 50

1.8

1.0

5.5

3.8

3.3

 Q6ZW76

ANKS3

Ankyrin repeat and SAM domain-containing protein 3

CTL

CTL

CTL

0.6

CTL

 Q8NCL9

APCDD1L

Protein APCDD1-like

CTL

2.4

CTL

1.9

3.0

 Q9BSF8

BTBD10

BTB/PoZ domain-containing protein 10

CTL

CTL

CTL

CTL

CTL

 Q8N5S9

CAMKK1

Calcium/calmodulin-dependent protein kinase kinase 1

CTL

CTL

0.8

3.9

CTL

 P49674

CSNK1E

Casein kinase I isoform epsilon

4.2

6.9

1.4

CTL

5.3

 Q9Y6M4

CSNK1G3

Casein kinase I isoform gamma-3

CTL

CTL

1.1

CTL

CTL

 P39880

CUX1

Homeobox protein cut-like 1

1.1

CTL

CTL

13.7

CTL

 Q9H8V3

ECT2

Protein ECT2

CTL

CTL

1.6

3.7

1.6

 O95864

FADS2

Fatty acid desaturase 2

8.3

4.2

4.5

2.2

1.7

 P02671

FGA

Fibrinogen alpha chain

CTL

CTL

73.9

0.5

4.4

 P02679

FGG

Fibrinogen gamma chain

18.9

CTL

42.8

0.4

3.0

 Q9NYZ3

GTSE1

G2 and S phase-expressed protein 1

CTL

CTL

CTL

CTL

4.0

 Q9Y2K7

KDM2A

Lysine-specific demethylase 2A

5.4

0.3

1.1

CTL

6.4

 Q9BVG8

KIFC3

Kinesin-like protein KIFC3

5.2

CTL

CTL

1.5

CTL

 Q659C4

LARP1B

La-related protein 1B

3.5

CTL

CTL

CTL

CTL

 Q15013

MAD2L1BP

MAD2L1-binding protein

CTL

CTL

CTL

0.7

CTL

 Q07864

POLE

DNA polymerase epsilon catalytic subunit A

CTL

CTL

3.5

CTL

1.1

 Q9P2K3

RCOR3

REST Corepressor 3

CTL

CTL

CTL

CTL

CTL

 O15541

RNF113A

RING finger protein 113A

1.2

1.2

CTL

18.5

4.8

 Q9GZN7

ROGDI

Protein rogdi homolog

CTL

0.0

CTL

CTL

1.8

 Q99719

SEPT5

Septin-5

4.8

CTL

CTL

CTL

0.5

 O95359

TACC2

Transforming acidic coiled-coil-containing protein 2

CTL

CTL

CTL

CTL

CTL

 O15040

TECPR2

Tectonin beta-propeller repeat-containing protein 2

2.0

3.8

CTL

6.3

0.8

 Q9P273

TENM3

Teneurin-3

3.9

CTL

3.2

2.1

1.3

 Q86SZ2

TRAPPC6B

Trafficking protein particle complex subunit 6B

0.3

–

CTL

CTL

CTL

 Q8IWR1

TRIM59

Tripartite motif-containing protein 59

CTL

3.2

4.0

CTL

0.9

 Q9NPG3

UBN1

Ubinuclein-1

CTL

CTL

CTL

CTL

CTL

 P62068

USP46

Ubiquitin carboxyl-terminal hydrolase 46

CTL

CTL

1.5

CTL

CTL

 Q5ST30

VARS2

Valine-tRNA ligase, mitochondrial

CTL

CTL

1.9

3.5

CTL

 Q9Y2K1

ZBTB1

Zinc finger and BTB domain-containing protein 1

0.5

CTL

CTL

7.3

CTL

 Q9ULJ6

ZMIZ1

Zinc finger MIZ domain-containing protein 1

4.6

CTL

CTL

1.6

CTL