Table 8 Cellular Component from the filtered (best charge state best amino acid sequence) X!TANDEM and SEQUEST results where the difference between room temperature versus ice cold samples was at least fivefold or greater for 718 gene symbols
Pathway ID | Pathway description | Count in gene set | False discovery rate |
|---|---|---|---|
GO:0005737 | Cytoplasm | 682 | 5.45E−19 |
GO:0044424 | Intracellular part | 795 | 8.65E−16 |
GO:0005622 | Intracellular | 800 | 2.61E−13 |
GO:0044444 | Cytoplasmic part | 506 | 3.57E−12 |
GO:0043229 | Intracellular organelle | 707 | 6.75E−12 |
GO:0043226 | Organelle | 750 | 1.63E−11 |
GO:0043231 | Intracellular membrane-bounded organelle | 664 | 1.79E−11 |
GO:0044422 | Organelle part | 523 | 8.31E−11 |
GO:0043227 | Membrane-bounded organelle | 716 | 9.14E−11 |
GO:0044446 | Intracellular organelle part | 509 | 4.29E−10 |
GO:0005623 | Cell | 841 | 1.37E−09 |
GO:0044464 | Cell part | 839 | 1.37E−09 |
GO:0012505 | Endomembrane system | 250 | 5.36E−05 |
GO:0005575 | Cellular_component | 883 | 6.89E−05 |
GO:0031090 | Organelle membrane | 217 | 6.89E−05 |
GO:0043233 | Organelle lumen | 281 | 0.00025 |
GO:0005634 | Nucleus | 429 | 0.000297 |
GO:0005829 | Cytosol | 227 | 0.000297 |
GO:0031974 | Membrane-enclosed lumen | 282 | 0.000446 |
GO:0043232 | Intracellular non-membrane-bounded organelle | 243 | 0.000538 |
GO:0070013 | Intracellular organelle lumen | 272 | 0.0011 |
GO:0016020 | Membrane | 516 | 0.00164 |
GO:0031988 | Membrane-bounded vesicle | 237 | 0.00164 |
GO:0098588 | Bounding membrane of organelle | 162 | 0.00272 |
GO:0016023 | Cytoplasmic membrane-bounded vesicle | 84 | 0.00325 |
GO:0031982 | Vesicle | 240 | 0.00413 |
GO:0005794 | Golgi apparatus | 107 | 0.0054 |
GO:0044428 | Nuclear part | 244 | 0.00708 |
GO:0031410 | Cytoplasmic vesicle | 88 | 0.00869 |
GO:0000139 | Golgi membrane | 55 | 0.0155 |
GO:0072562 | Blood microparticle | 16 | 0.0173 |
GO:0044431 | Golgi apparatus part | 67 | 0.02 |
GO:0031981 | Nuclear lumen | 222 | 0.0223 |
GO:0005759 | Mitochondrial matrix | 36 | 0.0233 |
GO:0043190 | ATP-binding cassette (ABC) transporter complex | 4 | 0.0278 |
GO:0070062 | Extracellular exosome | 188 | 0.0278 |
GO:0005783 | Endoplasmic reticulum | 113 | 0.0283 |
GO:0031838 | Haptoglobin-hemoglobin complex | 3 | 0.0293 |
GO:0032991 | Macromolecular complex | 283 | 0.0312 |
GO:0005730 | Nucleolus | 68 | 0.0368 |
GO:0044433 | Cytoplasmic vesicle part | 46 | 0.0415 |
GO:0012506 | Vesicle membrane | 38 | 0.0465 |
GO:0005654 | Nucleoplasm | 188 | 0.0478 |