Fig. 2
Top 10 canonical pathways most significantly altered in naive scrub typhus patients compared with normal subjects (a) and in patients treated with antibiotics compared with naive patients (b). The stacked bar chart displays the percentage of proteins up-regulated (red) and down-regulated (green), and of proteins not overlapping with the dataset (white), in each canonical pathway. The numerical value at the top of each bar represents the total number of genes in the canonical pathway. The secondary y-axis (right) shows the −log of the p value calculated by the Benjamini–Hochberg method