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Table 5 Complete list of all predicted AMPs in IA SF

From: Elucidating the endogenous synovial fluid proteome and peptidome of inflammatory arthritis using label-free mass spectrometry

Protein ID

Gene name

AA before

Sequence

AA after

AMP probability

P0C0L4-2

C4A

K

DDPDAPLQP

V

1

P02675

FGB

N

DNEEGFFS

A

1

P02675

FGB

N

DNEEGFFSA

R

1

P04083

ANXA1

I

ENEEQEYVQT

V

1

P02675

FGB

V

NDNEEGFF

S

1

P02675

FGB

V

NDNEEGFFS

A

1

P02675

FGB

V

NDNEEGFFSA

R

0.998

P04083

ANXA1

E

NEEQEYVQTV

K

0.994

P02675

FGB

A

PPPISGGGY

R

0.988

P02671-2

FGA

A

DSGEGDFL

A

0.981

P0C0L4-2

C4A

K

DDPDAPLQPV

T

0.979

P02671-2

FGA

F

SPMLGEFV

S

0.946

P02671-2

FGA

G

DSTFESKSY

K

0.939

P02671-2

FGA

A

DSGEGDFLA

E

0.923

P02671-2

FGA

F

DTASTGKTFPGFFSPM

L

0.914

P02675

FGB

V

NDNEEGFFSAR

G

0.911

P02671-2

FGA

F

DTASTGKTFP

G

0.909

P02452

COL1A1

V

GPPGPPGPPGPPGPP

S

0.868

P02452

COL1A1

P

GPPGPPGPPGPP

G

0.862

Q96A84-2

EMID1

P

PGPPGPPGPPGPPAP

V

0.851

P02452

COL1A1

P

GPPGPPGPPGPPG

L

0.842

Q6ZMI3-2

GLDN

Q

GPPGPPGPPGPPGPPG

P

0.842

P02452

COL1A1

P

GPPGPPGP

P

0.834

P02452

COL1A1

P

VGPPGPPGPPGPPGPP

S

0.833

P02452

COL1A1

P

VGPPGPPGPPGPP

G

0.824

P02461

COL3A1

P

GPAGPPGPPGPPG

T

0.818