From: Quantitative proteome analysis of Merkel cell carcinoma cell lines using SILAC
Cell line | UniProt entry name | Protein name | Gene symbol | Ratio (H/L) |
---|---|---|---|---|
BroLi | MFRN1_HUMAN | Mitoferrin-1 | SLC25A37 | 9.64 |
SF01_HUMAN | Splicing factor 1 | SF1 | 1.92 | |
N4BP1_HUMAN | NEDD4-binding protein 1 | N4BP1 | 1.65 | |
MKL-1 | H2A1H_HUMAN | Histone H2A type 1-H | HIST1H2AH | 5.25 |
HMGN2_HUMAN | Non-histone chromosomal protein HMG-17 | HMGN2 | 3.86 | |
C2C2L_HUMAN | C2 domain-containing protein 2-like | C2CD2L | 3.63 | |
DPY30_HUMAN | Protein dpy-30 homolog | DPY30 | 3.56 | |
STON1_HUMAN | Stonin-1 | STON1 | 3.18 | |
PREX2_HUMAN | Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein | PREX2 | 3.11 | |
CCAR1_HUMAN | Cell division cycle and apoptosis regulator protein 1 | CCAR1 | 2.96 | |
RFC1_HUMAN | Replication factor C subunit 1 | RFC1 | 2.89 | |
ATPB_HUMAN | ATP synthase subunit beta, mitochondrial | ATP5B | 2.87 | |
ROAA_HUMAN | Heterogeneous nuclear ribonucleoprotein A/B | HNRNPAB | 2.64 | |
DJB14_HUMAN | DnaJ homolog subfamily B member 14 | DNAJB14 | 2.53 | |
SF3B1_HUMAN | Splicing factor 3B subunit 1 | SF3B1 | 2.47 | |
RL29_HUMAN | 60S ribosomal protein L29 | RPL29 | 2.44 | |
HNRPM_HUMAN | Heterogeneous nuclear ribonucleoprotein M | HNRNPM | 2.39 | |
SUMO4_HUMAN | Small ubiquitin-related modifier 4 | SUMO4 | 2.38 | |
NDUS7_HUMAN | NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial | NDUFS7 | 2.29 | |
HSP7C_HUMAN | Heat shock cognate 71 kDa protein | HSPA8 | 2.19 | |
CH60_HUMAN | 60 kDa heat shock protein, mitochondrial | HSPD1 | 2.10 | |
BSDC1_HUMAN | BSD domain-containing protein 1 | BSDC1 | 2.06 | |
RS30_HUMAN | 40S ribosomal protein S30 | FAU | 2.01 | |
MXRA5_HUMAN | Matrix-remodeling-associated protein 5 | MXRA5 | 1.96 | |
ROA2_HUMAN | Heterogeneous nuclear ribonucleoproteins A2/B1 | HNRNPA2B1 | 1.89 | |
ROA1_HUMAN | Heterogeneous nuclear ribonucleoprotein A1 | HNRNPA1 | 1.89 | |
ROA3_HUMAN | Heterogeneous nuclear ribonucleoprotein A3 | HNRNPA3 | 1.89 | |
NPM_HUMAN | Nucleophosmin | NPM1 | 1.80 | |
CH10_HUMAN | 10 kDa heat shock protein, mitochondrial | HSPE1 | 1.70 | |
STK24_HUMAN | Serine/threonine-protein kinase 24 | STK24 | 1.70 | |
HNRPC_HUMAN | Heterogeneous nuclear ribonucleoproteins C1/C2 | HNRNPC | 1.66 | |
H2B1O_HUMAN | Histone H2B type 1-O | HIST1H2BO | 1.60 | |
PABP1_HUMAN | Polyadenylate-binding protein 1 | PABPC1 | 1.58 | |
I23O2_HUMAN | Indoleamine 2,3-dioxygenase 2 | IDO2 | 1.54 | |
MKL-2 | PADI6_HUMAN | Protein-arginine deiminase type-6 | PADI6 PAD6 | 9.47 |
CTL2_HUMAN | Choline transporter-like protein 2 | SLC44A2 | 6.74 | |
SRSF3_HUMAN | Serine/arginine-rich splicing factor 3 | SRSF3 | 5.87 | |
HMGN2_HUMAN | Non-histone chromosomal protein HMG-17 | HMGN2 | 5.10 | |
PABP1_HUMAN | Polyadenylate-binding protein 1 | PABPC1 | 4.02 | |
NDUS7_HUMAN | NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial | NDUFS7 | 3.84 | |
H2B1H_HUMAN | Histone H2B type 1-H | HIST1H2BH | 3.15 | |
COF1_HUMAN | Cofilin-1 | CFL1 | 2.30 | |
LRRT3_HUMAN | Leucine-rich repeat transmembrane neuronal protein 3 | LRRTM3 | 2.27 | |
CH10_HUMAN | 10 kDa heat shock protein, mitochondrial | HSPE1 | 2.20 | |
ACM2_HUMAN | Muscarinic acetylcholine receptor M2 | CHRM2 | 2.14 | |
S38AA_HUMAN | Putative sodium-coupled neutral amino acid transporter 10 | SLC38A10 | 2.14 | |
ROA1_HUMAN | Heterogeneous nuclear ribonucleoprotein A1 | HNRNPA1 | 2.08 | |
WDR62_HUMAN | WD repeat-containing protein 62 | WDR62 | 2.02 | |
ROA2_HUMAN | Heterogeneous nuclear ribonucleoproteins A2/B1 | HNRNPA2B1 | 2.01 | |
STMN1_HUMAN | Stathmin | STMN1 | 1.80 | |
TM266_HUMAN | Transmembrane protein 266 | TMEM266 | 1.77 | |
H2B2E_HUMAN | Histone H2B type 2-E | HIST2H2BE | 1.66 | |
TBA1A_HUMAN | Tubulin alpha-1A chain | TUBA1A | 1.64 | |
TBA1B_HUMAN | Tubulin alpha-1B chain | TUBA1B | 1.64 | |
HNRPK_HUMAN | Heterogeneous nuclear ribonucleoprotein K | HNRNPK | 1.60 | |
PRDX2_HUMAN | Peroxiredoxin-2 | PRDX2 | 1.50 | |
PeTa | ROA2_HUMAN | Heterogeneous nuclear ribonucleoproteins A2/B1 | HNRNPA2B1 | 4.46 |
ROA3_HUMAN | Heterogeneous nuclear ribonucleoprotein A3 | HNRNPA3 | 4.46 | |
H2A1B_HUMAN | Histone H2A type 1-B/E | HIST1H2AB | 4.23 | |
H2AJ_HUMAN | Histone H2A.J | H2AFJ | 4.23 | |
ROA1_HUMAN | Heterogeneous nuclear ribonucleoprotein A1 | HNRNPA1 | 2.98 | |
NIBL1_HUMAN | Niban-like protein 1 | FAM129B | 2.97 | |
CTL2_HUMAN | Choline transporter-like protein 2 | SLC44A2 | 2.96 | |
REPS2_HUMAN | RalBP1-associated Eps domain-containing protein 2 | REPS2 | 2.72 | |
URGCP_HUMAN | Up-regulator of cell proliferation | URGCP | 2.69 | |
H14_HUMAN | Histone H1.4 | HIST1H1E | 2.67 | |
H33_HUMAN | Histone H3.3 | H3F3A | 2.39 | |
K0895_HUMAN | Uncharacterized protein KIAA0895 | KIAA0895 | 2.36 | |
H15_HUMAN | Histone H1.5 | HIST1H1B | 2.17 | |
H2B1N_HUMAN | Histone H2B type 1-N | HIST1H2BN | 1.91 | |
H2B2E_HUMAN | Histone H2B type 2-E | HIST2H2BE | 1.90 | |
PRDX2_HUMAN | Peroxiredoxin-2 | PRDX2 | 1.80 | |
WaGa | SLX4I_HUMAN | Protein SLX4IP | SLX4IP | 33.84 |
TMM56_HUMAN | Transmembrane protein 56 | TMEM56 | 8.88 | |
S38AA_HUMAN | Putative sodium-coupled neutral amino acid transporter 10 | SLC38A10 | 6.38 | |
COQ6_HUMAN | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial | COQ6 | 4.57 | |
NEK5_HUMAN | Serine/threonine-protein kinase Nek5 | NEK5 | 4.36 | |
PEX16_HUMAN | Peroxisomal membrane protein PEX16 | PEX16 | 4.33 | |
PEAK1_HUMAN | Pseudopodium-enriched atypical kinase 1 | PEAK1 | 3.95 | |
PCBP2_HUMAN | Poly(rC)-binding protein 2 | PCBP2 | 3.83 | |
HS71A_HUMAN | Heat shock 70 kDa protein 1A | HSPA1A | 3.66 | |
FBX41_HUMAN | F-box only protein 41 | FBXO41 | 3.59 | |
HNRPC_HUMAN | Heterogeneous nuclear ribonucleoproteins C1/C2 | HNRNPC | 3.55 | |
HMMR_HUMAN | Hyaluronan mediated motility receptor | HMMR | 3.37 | |
SMYD5_HUMAN | SET and MYND domain-containing protein 5 | SMYD5 | 3.27 | |
MBNL2_HUMAN | Muscleblind-like protein 2 | MBNL2 | 2.47 | |
H4_HUMAN | Histone H4 | HIST1H4A | 2.45 | |
HNF4A_HUMAN | Hepatocyte nuclear factor 4-alpha | HNF4A | 2.35 | |
ASPG_HUMAN | N(4)-(beta-N-acetylglucosaminyl)-l-asparaginase | AGA | 2.20 | |
H2B1O_HUMAN | Histone H2B type 1-O | HIST1H2BO | 1.99 | |
H2B1D_HUMAN | Histone H2B type 1-D | HIST1H2BD | 1.97 | |
TBB5_HUMAN | Tubulin beta chain | TUBB | 1.89 | |
UGGG1_HUMAN | UDP-glucose:glycoprotein glucosyltransferase 1 | UGGT1 | 1.80 | |
UB2J1_HUMAN | Ubiquitin-conjugating enzyme E2 J1 | UBE2J1 | 1.80 | |
RLA2_HUMAN | 60S acidic ribosomal protein P2 | RPLP2 | 1.77 | |
SF01_HUMAN | Splicing factor 1 | SF1 | 1.71 | |
HNRL2_HUMAN | Heterogeneous nuclear ribonucleoprotein U-like protein 2 | HNRNPUL2 | 1.71 | |
ROAA_HUMAN | Heterogeneous nuclear ribonucleoprotein A/B | HNRNPAB | 1.70 | |
POP1_HUMAN | Ribonucleases P/MRP protein subunit POP1 | POP1 | 1.69 | |
PRDX2_HUMAN | Peroxiredoxin-2 | PRDX2 | 1.68 | |
CE57L_HUMAN | Centrosomal protein CEP57L1 | CEP57L1 | 1.67 | |
CCDC6_HUMAN | Coiled-coil domain-containing protein 6 | CCDC6 | 1.67 | |
KCTD9_HUMAN | BTB/POZ domain-containing protein KCTD9 | KCTD9 | 1.66 | |
ADCY1_HUMAN | Adenylate cyclase type 1 | ADCY1 | 1.59 | |
S35E2_HUMAN | Solute carrier family 35 member E2 | SLC35E2 | 1.55 | |
ATP5J_HUMAN | ATP synthase-coupling factor 6, mitochondrial | ATP5J | 1.51 | |
ATPA_HUMAN | ATP synthase subunit alpha, mitochondrial | ATP5A1 | 1.50 | |
MCC13 | CLCB_HUMAN | Clathrin light chain B | CLTB | 4.71 |
HSPB1_HUMAN | Heat shock protein beta-1 | HSPB1 | 3.23 | |
SNX4_HUMAN | Sorting nexin-4 | SNX4 | 2.83 | |
RL23A_HUMAN | 60S ribosomal protein L23a | RPL23A | 2.82 | |
PROF1_HUMAN | Profilin-1 | PFN1 | 2.51 | |
H2B1C_HUMAN | Histone H2B type 1-C/E/F/G/I | HIST1H2BC | 2.47 | |
ZN407_HUMAN | Zinc finger protein 407 | ZNF407 | 2.44 | |
H2B1K_HUMAN | Histone H2B type 1-K | HIST1H2BK | 2.42 | |
OPRD_HUMAN | Delta-type opioid receptor | OPRD1 | 2.42 | |
HGB1A_HUMAN | Putative high mobility group protein B1-like 1 | HMGB1P1 | 2.35 | |
PSME1_HUMAN | Proteasome activator complex subunit 1 | PSME1 | 2.29 | |
PRDX1_HUMAN | Peroxiredoxin-1 | PRDX1 | 2.22 | |
CAC1G_HUMAN | Voltage-dependent T-type calcium channel subunit alpha-1G | CACNA1G | 2.20 | |
H2B2F_HUMAN | Histone H2B type 2-F | HIST2H2BF | 2.18 | |
K2C5_HUMAN | Keratin, type II cytoskeletal 5 | KRT5 | 2.17 | |
RL4_HUMAN | 60S ribosomal protein L4 | RPL4 | 2.15 | |
LDHB_HUMAN | l-Lactate dehydrogenase B chain | LDHB | 2.14 | |
MT1E_HUMAN | Metallothionein-1E | MT1E | 2.14 | |
ILRL2_HUMAN | Interleukin-1 receptor-like 2 | IL1RL2 | 1.94 | |
MYPC2_HUMAN | Myosin-binding protein C, fast-type | MYBPC2 | 1.93 | |
NONO_HUMAN | Non-POU domain-containing octamer-binding protein | NONO | 1.84 | |
LMNA_HUMAN | Prelamin-A/C | LMNA | 1.82 | |
K2C8_HUMAN | Keratin, type II cytoskeletal 8 | KRT8 | 1.66 | |
NUCL_HUMAN | Nucleolin | NCL | 1.64 | |
PDLI1_HUMAN | PDZ and LIM domain protein 1 | PDLIM1 | 1.64 | |
RLA1_HUMAN | 60S acidic ribosomal protein P1 | RPLP1 | 1.64 | |
BAF_HUMAN | Barrier-to-autointegration factor | BANF1 | 1.63 | |
NPM_HUMAN | Nucleophosmin | NPM1 | 1.61 | |
HNRPK_HUMAN | Heterogeneous nuclear ribonucleoprotein K | HNRNPK | 1.61 | |
YBOX1_HUMAN | Nuclease-sensitive element-binding protein 1 | YBX1 | 1.60 | |
H2AJ_HUMAN | Histone H2A.J | H2AFJ | 1.56 | |
RL34_HUMAN | 60S ribosomal protein L34 | RPL34 | 1.55 | |
ROA1_HUMAN | Heterogeneous nuclear ribonucleoprotein A1 | HNRNPA1 | 1.52 | |
RS28_HUMAN | 40S ribosomal protein S28 | RPS28 | 1.52 | |
CQ047_HUMAN | Uncharacterized protein C17orf47 | C17orf47 | 1.52 |