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Table 2 List of top 64 proteins significantly differing in abundance between AD and control subjects in the EMIF-AD cohort

From: Optimized sample preparation and data analysis for TMT proteomic analysis of cerebrospinal fluid applied to the identification of Alzheimer’s disease biomarkers

Accession number

Gene name

BH-corrected p-value

log2-fold change

Number of observations control

Number of observations AD

P63104

YWHAZ

1.4E−24

0.49

122

91

P62258

YWHAE

1.8E−21

0.37

122

91

P09936

UCHL1

4.1E−19

0.37

106

77

Q9H4F8

SMOC1

5.8E−16

0.31

120

90

P61981

YWHAG

7.2E−14

0.31

109

83

P07196

NEFL

7.5E−13

0.58

69

52

P18669

PGAM1

7.5E−13

0.20

109

84

P05413

FABP3

5.6E−12

0.29

112

82

P31150

GDI1

5.6E−12

0.17

123

88

P47972

NPTX2

4.4E−11

−0.35

125

91

P62937

PPIA

1.8E−10

0.20

121

89

P00558

PGK1

3.0E−10

0.15

114

90

O94760

DDAH1

4.9E−08

0.18

124

93

P10636

MAPT

6.9E−07

0.40

56

45

P14174

MIF

9.7E−07

0.19

101

82

P04075

ALDOA

2.2E−06

0.19

124

90

P62942

FKBP1A

2.5E−06

0.21

105

78

Q92686

NRGN

4.3E−06

0.31

99

73

P16949

STMN1

5.8E−06

0.20

118

87

P40925

MDH1

6.0E−06

0.19

125

89

P33908

MAN1A1

6.0E−06

− 0.08

122

91

O95502

NPTXR

7.5E−06

− 0.24

126

91

Q6EMK4

VASN

1.2E−05

0.10

123

91

Q9Y2T3

GDA

1.4E−05

0.24

125

93

P12277

CKB

1.8E−05

0.14

120

90

Q12805

EFEMP1

1.8E−05

0.12

125

91

P36222

CHI3L1

2.2E−05

0.26

124

92

P06744

GPI

2.2E−05

0.21

73

67

P00492

HPRT1

2.4E−05

0.20

119

87

Q92765

FRZB

2.4E−05

0.20

125

92

O15240

VGF

2.7E−05

− 0.26

124

90

P60983

GMFB

3.9E−05

0.11

121

89

Q13421

MSLN

7.3E−05

− 0.23

121

89

O00142

TK2

2.6E−04

0.13

107

81

Q13228

SELENBP1

2.7E−04

− 0.15

124

90

P23297

S100A1

3.0E−04

0.22

48

33

P17677

GAP43

3.0E−04

0.19

126

90

Q92743

HTRA1

3.1E−04

0.09

126

92

P0DP23

CALM1

3.7E−04

0.16

120

89

P06733

ENO1

3.8E−04

0.14

119

89

P31946

YWHAB

3.9E−04

0.17

116

90

Q9HCB6

SPON1

4.2E−04

0.11

125

91

P62328

TMSB4X

4.6E−04

0.15

124

90

P10451

SPP1

6.1E−04

0.16

126

90

Q9Y279

VSIG4

6.3E−04

0.17

123

88

P29120

PCSK1

6.3E−04

− 0.22

121

90

P14618

PKM

7.4E−04

0.15

119

90

P10599

TXN

8.0E−04

0.11

121

89

P05060

CHGB

8.6E−04

− 0.14

125

90

P55286

CDH8

1.5E−03

− 0.11

124

91

Q14697

GANAB

1.6E−03

− 0.09

124

89

P01213

PDYN

1.8E−03

− 0.14

123

91

Q06830

PRDX1

1.9E−03

0.10

120

87

Q5VSG8

MANEAL

2.1E−03

− 0.10

124

90

Q9H2A7

CXCL16

2.7E−03

0.16

85

63

P08637

FCGR3A

2.8E−03

0.16

111

88

P54756

EPHA5

3.2E−03

− 0.13

126

93

O60241

ADGRB2

3.5E−03

− 0.13

121

90

P09104

ENO2

3.6E−03

0.12

125

89

Q92932

PTPRN2

3.8E−03

− 0.13

125

93

P13521

SCG2

4.5E−03

− 0.16

123

91

P01303

NPY

4.6E−03

− 0.24

99

71

P30086

PEBP1

5.3E−03

0.10

123

91

P01210

PENK

6.3E−03

− 0.12

121

90

  1. Data was normalized employing the TAMPOR function