Table 3 Percent accuracy of the mass spectrometry-based techniques relative to genomic sequencing
Genotype | Number of samples (based on genomic sequencing) | % Accuracy intact protein deconvolution | % Accuracy intact protein chromatogram | % Accuracy peptide |
|---|---|---|---|---|
E2/E2 | 0 | 100% | 100% | 100% |
E2/E3 | 6 | 100% | 100% | 100% |
E3/E3 | 18 | 100% | 100% | 100% |
E3/E4 | 9 | 78% | 78% | 89% |
E2/E4 | 3 | 100% | 66% | 100% |
E4/E4 | 2 | 100% | 100% | 100% |