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Table 1 List of top protein/peptide candidates identified in ovarian cancer ascites fluid

From: Deciphering the ovarian cancer ascites fluid peptidome

Parent protein

# of peptides (OvCa)

# of peptides (Benign)

Retinol-binding protein 4

1

0

Serum paraoxonase/arylesterase 1

14

0

Talin-1

2

0

Isoform 1 of ficolin-3

1

0

Vitronectin

31

7

Apolipoprotein F precursor

12

1

Isoform 1 of Vitamin D-Binding protein

21

0

Histidine-rich glycoprotein

16

0

Transketolase (highly similar cDNA)

4

0

Mannosidase

2

0

EGF containing fibulin-like extracellular matrix protein 1

3

0

Haptoglobin

47

0

  1. Number of total unique peptides identified (for each candidate parent protein) in the three ovarian cancer ascites samples (OvCa) and the three benign ascites samples. Thresholds for high-confidence peptide identifications were set to ensure that false discovery rate (FDR) at the peptide level was close to 1%.