Fig. 5
From: Comparison of iTRAQ and SWATH in a clinical study with multiple time points
Proteomic fold changes over time and comparison to targeted MS/MS analysis of specific peptides of two selected proteins (LYZ and S100A6). a Changes in LYZ and S100A6 protein expression levels over time relative to baseline expression, analyzed using iTRAQ, SWATH and MS/MS in two representative patients. b Fold change results between baseline sample and 12 month sample in 16 patients. Presented proteins were selected based on their known biological function. iTRAQ and SWATH results are based on average of two replicate injections and AQUA peptides analysis on single technical replicate analysis