Table 1 Breast cancer specific proteins detected by fully tryptic peptides and/or fully tryptic phosphopeptides (STYP) that show a Chi Square (χ2) value of ≥ 200. N is the number of protein accessions per Gene Symbol
Tryptic Gene_Symbol | Tryptic STYP | ||||
|---|---|---|---|---|---|
Gene Symbol | Mean X2 | n | Gene Symbol | Mean X2 | n |
CPEB1 | 3632.919337 | 8 | LTBP4 | 4340.217566 | 1 |
LTBP4 | 2560.471517 | 1 | C19orf82 | 3256.703566 | 1 |
HIF-1A | 1640.975019 | 1 | PMEPA1 | 1849.257201 | 1 |
C4A | 1626.866928 | 2 | C4A | 1703.128264 | 2 |
C4B | 1626.866928 | 2 | HIF-1A | 1668.954624 | 1 |
C4B_2 | 1612.006355 | 1 | C4B_2 | 1648.102936 | 1 |
C3 | 757.057969 | 2 | C4B | 1637.227896 | 2 |
IGHE | 656.105042 | 1 | CA7 | 1582.270693 | 1 |
RAB44 | 656.105042 | 1 | PCDHGA5 | 1462.852842 | 2 |
NEFM | 652.140957 | 5 | C8orf34 | 1189.441768 | 5 |
C19orf82 | 613.883173 | 1 | C3 | 835.343196 | 2 |
SLC35B1 | 479.46677 | 1 | KNOP1 | 822.636731 | 3 |
C8orf34 | 460.113072 | 5 | AMMECR1L | 794.024811 | 5 |
1D12A | 432.71876 | 1 | HMMR | 699.705336 | 1 |
HIF1A | 352.516679 | 3 | HTR3B | 670.791156 | 1 |
OCLN | 341.835514 | 3 | PCDHJ | 611.647195 | 1 |
APOE | 336.148697 | 3 | ZFAND1 | 522.966422 | 2 |
PTPDC1 | 316.183187 | 2 | PPID | 522.527735 | 1 |
EYA1 | 306.858733 | 1 | OXER1 | 509.701516 | 1 |
HLA-DRB1 | 306.858733 | 1 | DCHS2 | 507.103436 | 1 |
WWC1 | 294.679057 | 9 | RAB44 | 449.029189 | 1 |
ZNF562 | 273.551291 | 13 | NUP50 | 431.635555 | 4 |
CFI | 251.996191 | 7 | HLA-DRB1 | 417.238656 | 1 |
MGAT1 | 241.814491 | 1 | PCED1A | 375.630369 | 4 |
NDUFA1 | 241.814491 | 1 | HIF1A | 304.82744 | 3 |
NOGOC | 241.814491 | 1 | CHMP5 | 297.080368 | 2 |
OR1E1 | 241.814491 | 1 | HMP19 | 289.436434 | 5 |
OR1E2 | 241.814491 | 1 | LOC102723665 | 286.501857 | 1 |
PTMA | 234.938717 | 1 | CYC1 | 260.817537 | 2 |
HSA12 | 218.336655 | 1 | GCSH | 260.051794 | 1 |
ELTD1 | 206.644334 | 1 | CNBP | 259.243457 | 7 |
GCSH | 202.57471 | 1 | SMIM12 | 256.548507 | 1 |